Hi all,
I’m facing problems in running the GYRE configuration on nemo 4.2. it compiles without errors (with default keys bld::tool::fppkeys key_top key_linssh key_xios), but out of the box it won’t run with ./nemo (nor with mprun -np X ./nemo). Below the the ocean.output file
===>>> : E R R O R
===========
misspelled variable in namelist namctl in reference namelist iostat = 5010
CNRS - NERC - Met OFFICE - MERCATOR-ocean - CMCC
NEMO team
Ocean General Circulation Model
NEMO version 4.0 (2020)
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^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
AAAAAAAA
par_kind : wp = Working precision = dp = double-precision
~~~~~~~~ ****************
usr_def_nam : read the user defined namelist (namusr_def) in namelist_cfg
~~~~~~~~~~~
Namelist namusr_def : GYRE case
GYRE used as Benchmark (=T) ln_bench = F
inverse resolution & implied domain size nn_GYRE = 1
Ni0glo = 30*nn_GYRE Ni0glo = 32
Nj0glo = 20*nn_GYRE Nj0glo = 22
number of model levels jpkglo = 31
===>>> : E R R O R
===========
misspelled variable in namelist nammpp in reference namelist iostat = 5010
Namelist nammpp
jpni and jpnj will be calculated automatically
avoid use of mpi_allgather at the north fold ln_nnogather = F
halo width (applies to both rows and columns) nn_hls = 1
choice of communication method nn_comm = 0
===>>> : E R R O R
===========
misspelled variable in namelist nambdy in reference namelist (mppini) iostat = 5010
For your information:
list of the best partitions including land supression
-----------------------------------------------------
nb_cores oce: 1, land domains excluded: 0 ( 0.0%), largest oce domain: 816 ( 34 x 24 )
-----------------------------------------------------------
apparently the error is in the reading of namctl and nammpp. These two entries in nameless_ref are
!-----------------------------------------------------------------------
&nammpp ! Massively Parallel Processing ("key_mpp_mpi")
!-----------------------------------------------------------------------
cn_mpi_send = 'I' ! mpi send/recieve type ='S', 'B', or 'I' for standard send,
! ! buffer blocking send or immediate non-blocking sends, resp.
nn_buffer = 0 ! size in bytes of exported buffer ('B' case), 0 no exportation
ln_nnogather = .true. ! activate code to avoid mpi_allgather use at the northfold
jpni = 0 ! jpni number of processors following i (set automatically if < 1)
jpnj = 0 ! jpnj number of processors following j (set automatically if < 1)
/
!-----------------------------------------------------------------------
&namctl ! Control prints (default: OFF)
!-----------------------------------------------------------------------
ln_ctl = .FALSE. ! Toggle all report printing on/off (T/F); Ignored if sn_cfctl%l_config is T
sn_cfctl%l_config = .TRUE. ! IF .true. then control which reports are written with the following
sn_cfctl%l_runstat = .FALSE. ! switches and which areas produce reports with the proc integer settings.
sn_cfctl%l_trcstat = .FALSE. ! The default settings for the proc integers should ensure
sn_cfctl%l_oceout = .FALSE. ! that all areas report.
sn_cfctl%l_layout = .FALSE. !
sn_cfctl%l_mppout = .FALSE. !
sn_cfctl%l_mpptop = .FALSE. !
sn_cfctl%procmin = 0 ! Minimum area number for reporting [default:0]
sn_cfctl%procmax = 1000000 ! Maximum area number for reporting [default:1000000]
sn_cfctl%procincr = 1 ! Increment for optional subsetting of areas [default:1]
sn_cfctl%ptimincr = 1 ! Timestep increment for writing time step progress info
nn_print = 0 ! level of print (0 no extra print)
nn_ictls = 0 ! start i indice of control sum (use to compare mono versus
nn_ictle = 0 ! end i indice of control sum multi processor runs
nn_jctls = 0 ! start j indice of control over a subdomain)
nn_jctle = 0 ! end j indice of control
nn_isplt = 1 ! number of processors in i-direction
nn_jsplt = 1 ! number of processors in j-direction
ln_timing = .false. ! timing by routine write out in timing.output file
ln_diacfl = .false. ! CFL diagnostics write out in cfl_diagnostics.ascii
/
while in my namelist_cfg they are empty
!-----------------------------------------------------------------------
&nammpp ! Massively Parallel Processing
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namctl ! Control prints (default: OFF)
!-----------------------------------------------------------------------
/
Any hint why this happens? I need to use this configuration to port my implementations to 4.2 (and in the future to 5.0).
Edit: I’ve just noticed the error in nambdy as well, but this entry is absent from my nameless_cfg.
Cheers
Francesco